The detailed information of tRNA gene sequence


Sequence ID>FU090900016
Genome IDAE016819
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr6
Start position on genome 43583
End posion on genome 43499
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tataaattatctcgctcctttccaaaggaattgaaactatcttgaactatggtggtgcatttgtacccaggcaaaccgaaacaggtaacattaaaacgtt
tRNA gene sequence 
CTCCCGGTAGCCAAGTTGGTTTAAGGCGCCAGACTGTAAATCTGGAGATCGGGTGTTCGA
CTCACCCCCGGGAGAttt
Downstream region at tRNA end position 
tttttggtaagcgaaccattttgttatggataatcgcactatattgttaagcaaagaacttatcactcttcccaccgaaccaagcagcgcaccatggtca
Secondary structure (Cloverleaf model)
>FU090900016	Tyr	GTA
                   t      Attt tttttggtaagcgaaccattttgttatggataatcgcactatattgttaagcaaagaacttatcactcttcccaccgaaccaagcagcgcaccatggtca
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     C C C A C     A
    T T G A        A      | | | | |     G
  G         A C C G       G G G T G     C
  G           | | |                 T T
  T         A G G C
    T T A          G     AGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    G T A
intron: position=38, length=10 (in A-loop)
CGGATTTGTA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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