The detailed information of tRNA gene sequence


Sequence ID>FU090900125
Genome IDCR382139
Search identical group
Phylum/ClassAscomycota
SpeciesDebaryomyces hansenii CBS767
Chromosome chrG
Start position on genome 1809622
End posion on genome 1809722
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tagctgtggacaataaacgacttatattgaaccgtttttgcaacattttggaaagagacgtatatctactcttttcttccactatagtgttcaggaacta
tRNA gene sequence 
TCCTTATTAGCTCAGTTGGTAGAGCGTTCGGCTTTTAACCGAAATGTCCAGGGTTCGAGC
CCCTGATGAGGAGttc
Downstream region at tRNA end position 
tatttttttttctttgttccagcttgtctaaggaaattgttgtatcaatgtcgcgctgttctatcaatttccgtgtcgcatactcatcccccctttaagc
Secondary structure (Cloverleaf model)
>FU090900125	Lys	TTT
                   a      Gttc tatttttttttctttgttccagcttgtctaaggaaattgttgtatcaatgtcgcgctgttctatcaatttccgtgtcgcatactcatcccccctttaagc
                     T - A
                     C - G
                     C - G
                     T - A
                     T + G
                     A - T
                     T - A          C G
                    T     G T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    T T T
intron: position=38, length=28 (in A-loop)
AGGATTAAAGATTTCTGTCAAAGAGTCG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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