The detailed information of tRNA gene sequence


Sequence ID>FU090900220
Genome IDCR382128
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrB
Start position on genome 1692293
End posion on genome 1692189
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tcagaacgactccaacgaatgcattccatacgtattattcaatacgcttagtaatcatcgcattcctgctccaggcccacctcactttaggccagtattc
tRNA gene sequence 
GGGAGTTTGGCCGAGCGGTCTAAGGCGCCAGGTTTAGGCCCTGGTATCGAAAGATGCGGG
AGTTCGAATCTCCCAGCTCTCAttt
Downstream region at tRNA end position 
ttgctggccgtcatgcccttattctttttgcctgcctgattgcgacttatccatacatgttcgtacaatgcaaacaacctgcttttgggctacagggttc
Secondary structure (Cloverleaf model)
>FU090900220	Leu	TAG
                   c      Attt ttgctggccgtcatgcccttattctttttgcctgcctgattgcgacttatccatacatgttcgtacaatgcaaacaacctgcttttgggctacagggttc
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G G G A G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TATCGAAAGATGC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G *
                    T A G
intron: position=38, length=23 (in A-loop)
TGTAACACGCTTAAATATAAATT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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