The detailed information of tRNA gene sequence


Sequence ID>FU090900262
Genome IDCR382130
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrD
Start position on genome 480733
End posion on genome 480813
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttgcctggctagctcaatcggtagagcgtgagactcttattagtaagtaatctcaaggctgtgggttcaagccccacgtcgggctattaacgctaccatt
tRNA gene sequence 
TCCGATATAGTGTAGGGGCTATCACATCACGCTCTCACCGTGGAGACCGGGGTTCGATTC
CCCGTATCGGAGttc
Downstream region at tRNA end position 
agagtctcttgcgattctttttctccagctttttgctccagcactttttgctctagtgttgcttgtctggtcgattgctatattttgcgtcaagtttcaa
Secondary structure (Cloverleaf model)
>FU090900262	Glu	CTC
                   t      Gttc agagtctcttgcgattctttttctccagctttttgctccagcactttttgctctagtgttgcttgtctggtcgattgctatattttgcgtcaagtttcaa
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     G C C C C     A
      G G A        A      | | | | |     G
    G       T G T G       C G G G G     C
    G         | | |                 T T
    C       T C A C
      T A          A     AGAC
                    T + G
                    C - G
                    A - T
                    C - G
                    G - C
                  C       C
                  T       A *
                    C T C
intron: position=38, length=9 (in A-loop)
TAATGAGAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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