The detailed information of tRNA gene sequence


Sequence ID>SC0100104
Genome IDNC_001141
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr9
Start position on genome 175028
End posion on genome 175100
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
taattcaggatatgcgcaagccacctacagattatagaagcagtcgagtacgaatcactgtgaccgtcatcctagataaatagtatagcttgatgaagagtactgaaccaacaagtacga
tRNA gene sequence 
GCTTCTATGGCCAAGTTGGTAAGGCGCCACACTAGTAATGTGGAGATCATCGGTTCAAAT
CCGATTGGAAGCAatt
Downstream region at tRNA end position 
atttttttcttcggcacgtcatacaccttgtaatgagtgtactaattctctcttcaaaaagatcattgtatgttttatgttttgtctggaaaaacatatagtacggatatttttgaaaaa
Secondary structure (Cloverleaf model)
>SC0100104	Thr	AGT
                   a      Aatt atttttttcttcggcacgtcatacaccttgtaatgagtgtactaattctctcttcaaaaagatcattgtatgttttatgttttgtctggaaaaacatatagtacggatatttttgaaaaa
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     T + G
                     A - T          T A
                    T     T A G C C     A
      T G A        G      | | | | |     A
    T       A C C G       A T C G G     C
    G         | | |                 T T
    G       A G G C
      T A          G     AGATC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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