The detailed information of tRNA gene sequence


Sequence ID>FG091800017
Genome IDAE017344
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr4
Start position on genome 1471207
End posion on genome 1471108
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position
cgcagattccctaattacgaaagaaagacgacacatgtttatgggaagcgctatatatcatgcatcatgtcataagtgaaattagaaaacatatattgaA
tRNA gene sequence
GCCGGCGTGGCCAAATGGTTACGGCGTCCGCTTCCTAAGCGGGAGATTGTGGGTTCGATC
CCCACCGTTGGTTTat
Downstream region at tRNA end position
tttttgcttttcgatcttttttacatcttcgttgatgtaggagtcgaacagagtatcgtagtttaggattattcctcgaatagagctgttcgctggtctt
Secondary structure (Cloverleaf model)
>FG091800017	Arg	CCT
                   A      TTat tttttgcttttcgatcttttttacatcttcgttgatgtaggagtcgaacagagtatcgtagtttaggattattcctcgaatagagctgttcgctggtctt
                     G + T
                     C - G
                     C - G
                     G + T
                     G + T
                     C - G
                     G - C          C T
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       A C C G       G T G G G     C
    G         | | |                 T T
    T       C G G C
      T A          G     AGATT
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A *
                    C C T
intron: position=38, length=25 (in A-loop)
TTAAACGATTATCGAATCAGCCGGT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK