The detailed information of tRNA gene sequence


Sequence ID>FG091900189
Genome IDAE017341
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr1
Start position on genome 559251
End posion on genome 559336
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cttgcgagtgtgcgacacgcgagcgtcaccttctatttcacacttctgcctataattgtccacgttatcaaacctcaggtaccatgcatttcaacaacaa
tRNA gene sequence 
GCCTCGGTAGTTTAGTGGTTATAATTTTTCACTTGTAATGAAAGGGTCCTGTGTTCGACT
CACAGCCGTGGCAtca
Downstream region at tRNA end position 
tttttttgctttttgttcccccaataaaattataggttttaggcggttccatgctttctaaatacttccactagcttctttcgtcgatgctggctcattt
Secondary structure (Cloverleaf model)
>FG091900189	Thr	TGT
                   a      Atca tttttttgctttttgttcccccaataaaattataggttttaggcggttccatgctttctaaatacttccactagcttctttcgtcgatgctggctcattt
                     G - C
                     C - G
                     C - G
                     T   T
                     C - G
                     G - C
                     G - C          T C
                    T     G A C A C     A
      T G A        A      | | | | |     G
    G       T T T G       C T G T G     C
    G         | | +                 T T
    T       T A A T
      T A          T     GGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A *
                    T G T
intron: position=38, length=13 (in A-loop)
GTGTTTCTACATG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK