The detailed information of tRNA gene sequence


Sequence ID>FG091900201
Genome IDAE017342
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr2
Start position on genome 1277694
End posion on genome 1277608
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ctatcatattccttcctttgtttgcagggcaaaataagaatatgcccagaatggtttatgatggcttataagattgcagttttaaccgacatttaagaaa
tRNA gene sequence 
GCCCTTGTAGCTCAGGGGTTAGAGTATGGCCTTCGTAAGGTTAGGGTCCATGGTTCAAAT
CCATGCTGGGGCAgtt
Downstream region at tRNA end position 
cttttttcctgcactacttttttttctttttcgttgttgttattattgtattttattatcttaattaggctgataattggaaaggcggttttcgccgctg
Secondary structure (Cloverleaf model)
>FG091900201	Thr	CGT
                   a      Agtt cttttttcctgcactacttttttttctttttcgttgttgttattattgtattttattatcttaattaggctgataattggaaaggcggttttcgccgctg
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T   T
                     G - C          T A
                    T     G T A C C     A
      G G A        A      | | | | |     A
    G       C T C G       C A T G G     C
    G       | | | +                 T T
    T       G A G T
      T A          A     GGGTC
                    T - A
                    G + T
                    G + T
                    C - G
                    C - G
                  T       A
                  T       A *
                    C G T
intron: position=38, length=14 (in A-loop)
GTTAATACGAGGTC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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