The detailed information of tRNA gene sequence


Sequence ID>W10123927
Genome IDAEAN01000961
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas syringae pv. aptata str. DSM 50252 [AEAN]
Start position on genome 1104
End posion on genome 1017
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcaacgaagt
tRNA gene sequence 
GGAGGTATGGCCGAGTGGTTTAAGGCAGCAGTCTTGAAAACTGCCGACTGTAACAGGTCC
TAGAGTTCGAATCTCTATGCCTCCGCCA
Downstream region at tRNA end position 
tatttggcag
Secondary structure (Cloverleaf model)
>W10123927	Ser	TGA
                   t      GCCA tatttggcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     A T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       T A G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGACTGTAACAGGTCC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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