The detailed information of tRNA gene sequence


Sequence ID>W10200019
Genome IDADVG01000001
Search identical group
Phylum/ClassChloroflexota
SpeciesKtedonobacter racemifer DSM 44963 [ADVG]
Start position on genome 1639230
End posion on genome 1639133
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
ccaccgacga
tRNA gene sequence 
GGAGGCGTAGGGGCCCCGGTGGGTCTCACCGTCTTCAAAACGGCTGGGGGGTCGCTCGGC
GCGGTCCCCGGTGAGTTCGACTCTCATACGCCTCTGCCt
Downstream region at tRNA end position 
ttttgagtga
Secondary structure (Cloverleaf model)
>W10200019	seC	TCA
                   a      GCCt ttttgagtga
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     T A C T C     A
      C C C        G      + | | | |     G
    G       C G G G       G T G A G     C
    G       | + | +                 T T
    T       G T C T
      G G          C     TGGGGGGTCGCTCGGCGCGGTCCCCG
                    A   C
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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