The detailed information of tRNA gene sequence


Sequence ID>WENV11100371
Genome IDAERA01000704
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 368
End posion on genome 444
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
atgaaccgtt
tRNA gene sequence 
CGGGGTGTAGCGCAGTCTGGTAGCGCACTTGTCTGGGGGACAAGTGGTCGTCGGTTCGAA
TCCGGCCACCCCGACCA
Downstream region at tRNA end position 
atcgatgcac
Secondary structure (Cloverleaf model)
>WENV11100371	Pro	GGG
                   t      ACCA atcgatgcac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | + | | |     G
    C       C G C G       G T C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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