The detailed information of tRNA gene sequence


Sequence ID>WENV11100401
Genome IDAERA01002280
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 7209
End posion on genome 7282
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcctgtttc
tRNA gene sequence 
GGGCCCATAGCTCAGCGGTTAGAGCGTCTGACTCATAATCAGGTGGTCCCTGGTTCGAAC
CCAGGTGGGCCCACtt
Downstream region at tRNA end position 
tcttttatct
Secondary structure (Cloverleaf model)
>WENV11100401	Met	CAT
                   c      ACtt tcttttatct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     TGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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