The detailed information of tRNA gene sequence


Sequence ID>WENV11100414
Genome IDAERA01003652
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 301
End posion on genome 209
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgacagaccc
tRNA gene sequence 
GGAGTGATGCCCGAGTGGCCGAAGGGGCTCCCCTGCTAAGGGAGTATAGGGTCAAAAGCC
TTATCGAGGGTTCGAATCCCTCTCACTCCGCCA
Downstream region at tRNA end position 
gacataaaaa
Secondary structure (Cloverleaf model)
>WENV11100414	Ser	GCT
                   c      GCCA gacataaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATAGGGTCAAAAGCCTTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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