The detailed information of tRNA gene sequence


Sequence ID>WENV11100450
Genome IDAERA01009113
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 326
End posion on genome 237
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgctgttcc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCACCGCACTCGAAATGCGGCATACTCGCAAGGGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cttcggaaca
Secondary structure (Cloverleaf model)
>WENV11100450	Ser	CGA
                   c      GCCA cttcggaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CATACTCGCAAGGGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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