The detailed information of tRNA gene sequence


Sequence ID>WENV11100471
Genome IDAERA01012174
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 14484
End posion on genome 14560
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttttgtagtt
tRNA gene sequence 
CGGGATGTAGCGCAGTCCGGTAGCGCACCTGCTTTGGGAGCAGGGGGTCCCAGGTTCAAA
TCCTGGTATCCCGACAA
Downstream region at tRNA end position 
aaagaggcca
Secondary structure (Cloverleaf model)
>WENV11100471	Pro	TGG
                   t      ACAA aaagaggcca
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G + T          T A
                    T     G G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       C C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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