The detailed information of tRNA gene sequence


Sequence ID>WENV11100490
Genome IDAERA01015279
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 109
End posion on genome 34
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcattccgT
tRNA gene sequence 
AGGGGGTTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGCTGCGGGTTCGATT
CCTGCACCCCCTGTCg
Downstream region at tRNA end position 
aggccggccc
Secondary structure (Cloverleaf model)
>WENV11100490	Trp	CCA
                   T      GTCg aggccggccc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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