The detailed information of tRNA gene sequence


Sequence ID>WENV11100493
Genome IDAERA01015587
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 377
End posion on genome 286
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atattattcC
tRNA gene sequence 
GGAAGAGTGCCCGAGTGGTTTAAGGGAACAGTCTTGAAAACTGTCGTGTCGGAAACGGCA
CCGTGAGTTCGAATCTCACCTCTTCCGCCC
Downstream region at tRNA end position 
Agaataaatt
Secondary structure (Cloverleaf model)
>WENV11100493	Ser	TGA
                   C      GCCC Agaataaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C C       G T G A G     C
    G         | | |                 T T
    T       A G G G
      T T A        A     CGTGTCGGAAACGGCACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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