The detailed information of tRNA gene sequence


Sequence ID>WENV11100495
Genome IDAERA01015821
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 249
End posion on genome 174
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccttcaccgt
tRNA gene sequence 
GGGGCCGTGGCGCAGTTGGGAGCGCGTCTGAATGGCATTCAGAAGGTCAGGGGTTCGAAT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
cgagaatgcg
Secondary structure (Cloverleaf model)
>WENV11100495	Ala	GGC
                   t      ACCA cgagaatgcg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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