The detailed information of tRNA gene sequence


Sequence ID>WENV11100504
Genome IDAERA01017037
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 47
End posion on genome 123
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gcactgctgt
tRNA gene sequence
GGCTATGTAGCTCAGACGGTTAGAGCGCGAGACTCATAATCCCGAGGTCGGTGGTTCGAT
CCCACCCATAGCCACCA
Downstream region at tRNA end position
tgtgttgcac
Secondary structure (Cloverleaf model)
>WENV11100504	Met	CAT
                   t      ACCA tgtgttgcac
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          C T
                    T     C C A C C     A
      A G A        A      | | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    A   C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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