The detailed information of tRNA gene sequence


Sequence ID>WENV11100513
Genome IDAERA01018188
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 298
End posion on genome 222
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctcggatga
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAA
CCCAACCAGACCCACCA
Downstream region at tRNA end position 
aatcaaggga
Secondary structure (Cloverleaf model)
>WENV11100513	Ile	GAT
                   a      ACCA aatcaaggga
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          C A
                    T     C A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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