The detailed information of tRNA gene sequence


Sequence ID>WENV11100514
Genome IDAERA01018188
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 198
End posion on genome 123
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcgagacagg
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGGCGGCTTTGCAAGCCGTAGGTCGTCGGTTCGATC
CCGACCAGCTCCACCA
Downstream region at tRNA end position 
gcgcagggtg
Secondary structure (Cloverleaf model)
>WENV11100514	Ala	TGC
                   g      ACCA gcgcagggtg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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