The detailed information of tRNA gene sequence


Sequence ID>WENV11100529
Genome IDAERA01019299
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 419
End posion on genome 330
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtcaaatat
tRNA gene sequence 
GGTGAGGTGTCCGAGCGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGGAAACCGTA
TCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tattcgaaag
Secondary structure (Cloverleaf model)
>WENV11100529	Ser	GGA
                   t      GCCA tattcgaaag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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