The detailed information of tRNA gene sequence


Sequence ID>WENV11100541
Genome IDAERA01020880
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 150
End posion on genome 75
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agcagtttct
tRNA gene sequence 
AGGGGTATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAGGTTCGATT
CCTACTGCCCCTGCCA
Downstream region at tRNA end position 
tcatcgccac
Secondary structure (Cloverleaf model)
>WENV11100541	Trp	CCA
                   t      GCCA tcatcgccac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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