The detailed information of tRNA gene sequence


Sequence ID>WENV11100563
Genome IDAERA01024439
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 134
End posion on genome 58
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaatgttcgt
tRNA gene sequence 
GGCTGGGTAGCTCAGCTGGTTAGAGCGCGGGATTCATAACCCCGAGGTCGGGAGTTCAAG
TCTCCCCCCCGCCACCA
Downstream region at tRNA end position 
ctttcaatcg
Secondary structure (Cloverleaf model)
>WENV11100563	Met	CAT
                   t      ACCA ctttcaatcg
                     G - C
                     G - C
                     C - G
                     T   C
                     G - C
                     G - C
                     G - C          T G
                    T     C C C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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