The detailed information of tRNA gene sequence


Sequence ID>WENV11100568
Genome IDAERA01025306
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 296
End posion on genome 220
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaacagttta
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGAGGGTCAACGGTTCGAA
TCCGTTATCCTCCACAA
Downstream region at tRNA end position 
tttctgaacg
Secondary structure (Cloverleaf model)
>WENV11100568	Ala	TGC
                   a      ACAA tttctgaacg
                     G - C
                     G - C
                     G + T
                     G - C
                     A   C
                     A - T
                     T - A          T A
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C   A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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