The detailed information of tRNA gene sequence


Sequence ID>WENV11100586
Genome IDAERA01028441
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 237
End posion on genome 148
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgcccttgc
tRNA gene sequence 
GGAGGCGTGGCAGAGCGGTTGAATGCAACGGTCTTGAAAACCGTCAGGGGTTTGCGCCCC
TCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
agaatgcgcg
Secondary structure (Cloverleaf model)
>WENV11100586	Ser	TGA
                   c      GCCA agaatgcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAGGGGTTTGCGCCCCTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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