The detailed information of tRNA gene sequence


Sequence ID>WENV11100588
Genome IDAERA01028885
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 109
End posion on genome 33
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cctcatcgtt
tRNA gene sequence 
CGGGGTGTGGCGCAGCCTGGTAGCGCGCTTCGTTCGGGTCGAAGAGGTCGCCGGTTCGAG
TCCGGCCACCCCGACAA
Downstream region at tRNA end position 
aaaaaccgca
Secondary structure (Cloverleaf model)
>WENV11100588	Pro	CGG
                   t      ACAA aaaaaccgca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G G C C     A
      C G A        G      | | | | |     G
    C       C G C G       G C C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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