The detailed information of tRNA gene sequence


Sequence ID>WENV11100595
Genome IDAERA01031702
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 31095
End posion on genome 31019
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcgttttttt
tRNA gene sequence 
CGGGATGTAGCGCAGCCCGGTAGCGCACTACGTTCGGGACGTAGGGGTCGCTGGTTCAAA
TCCAGTCATCCCGACCG
Downstream region at tRNA end position 
gagaaatcct
Secondary structure (Cloverleaf model)
>WENV11100595	Pro	CGG
                   t      ACCG gagaaatcct
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     A
    C       C G C G       G C T G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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