The detailed information of tRNA gene sequence


Sequence ID>WENV11100718
Genome IDAEWW01018060
Search identical group
Phylum/Class[AEWW] ant fungus garden metagenome; Atta cephalotes fungus garden
Species
Start position on genome 386
End posion on genome 292
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atcgaggcgc
tRNA gene sequence 
GGAAGGTCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAATCCAGATGGGACCGCCAGCGG
CCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aaatttacat
Secondary structure (Cloverleaf model)
>WENV11100718	SeC(p)	TCA
                   c      GCCA aaatttacat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G A          G     ATGGGACCGCCAGCGGCCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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