The detailed information of tRNA gene sequence


Sequence ID>WENV11100797
Genome IDAEWW01032102
Search identical group
Phylum/Class[AEWW] ant fungus garden metagenome; Atta cephalotes fungus garden
Species
Start position on genome 12043
End posion on genome 12137
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atcgaggcgc
tRNA gene sequence 
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCGG
TCCCGGGCAGGTTCAACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aagtttctcn
Secondary structure (Cloverleaf model)
>WENV11100797	SeC(p)	TCA
                   c      GCCA aagtttctcn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     A
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGCCGCCAGCGGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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