The detailed information of tRNA gene sequence


Sequence ID>WENV11100886
Genome IDAFSR01000152
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 8183
End posion on genome 8256
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
agaaaagcgc
tRNA gene sequence
CGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACTGGTTCAAA
TCCAGTCCCCGCTAtgc
Downstream region at tRNA end position
ctgagagacg
Secondary structure (Cloverleaf model)
>WENV11100886	Met	CAT
                   c      Atgc ctgagagacg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G A C C     A
      C G A        A      | | | | |     A
    C       C G A G       A C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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