The detailed information of tRNA gene sequence


Sequence ID>WENV11100910
Genome IDAFSR01000381
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 686
End posion on genome 775
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccttgagat
tRNA gene sequence 
GGGGAGGTGACGGAGCGGTTGAACGTGCTCGTCTCGAAAACGAGTTGGGTCTGAAAGCCC
ACGTGGGTTCGAATCCCACCCTCCCCGCCA
Downstream region at tRNA end position 
agaaccgaga
Secondary structure (Cloverleaf model)
>WENV11100910	Ser	CGA
                   t      GCCA agaaccgaga
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C A       G T G G G     C
    G         | | |                 T T
    T       A C G T
      T G A        G     TTGGGTCTGAAAGCCCAC
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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