The detailed information of tRNA gene sequence


Sequence ID>WENV11100954
Genome IDAFSR01001085
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 2504
End posion on genome 2417
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
cagatgtttc
tRNA gene sequence
GGAGGGGTGGCCGAGTGGCTGAAGGCGCAGCATTGGAAATGCTGTATACGGGAAACTGTA
TCGAGGGTTCGAATCCCTCCTCCTCCGCtt
Downstream region at tRNA end position
tggctttgta
Secondary structure (Cloverleaf model)
>WENV11100954	Ser	GGA
                   c      GCtt tggctttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGAAACTGTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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