The detailed information of tRNA gene sequence


Sequence ID>WENV11100963
Genome IDAFSR01001181
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 9541
End posion on genome 9616
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccttggtgt
tRNA gene sequence 
GGGACTTTAGCTCAACGGTTAGAGCAGCGGACTCATAATCCGTTGGTTGCAGGTTCGAAT
CCTGCAAGTCCCACCA
Downstream region at tRNA end position 
ctttctgaag
Secondary structure (Cloverleaf model)
>WENV11100963	Met	CAT
                   t      ACCA ctttctgaag
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     T - A          T A
                    T     C G T C C     A
      C A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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