The detailed information of tRNA gene sequence


Sequence ID>WENV11100979
Genome IDAFSR01001270
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 47076
End posion on genome 46986
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctatacttC
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGTTTAATCGGTCGGTCTCGAAAACCGATGTAGTCGCAAGACTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCC
Downstream region at tRNA end position 
ctattttctc
Secondary structure (Cloverleaf model)
>WENV11100979	Ser	CGA
                   C      GCCC ctattttctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      T T A        G     TGTAGTCGCAAGACTACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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