The detailed information of tRNA gene sequence


Sequence ID>C11122642
Genome IDCP002829
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesThermodesulfobacterium geofontis OPF15 [CP002829]
Start position on genome 448016
End posion on genome 448112
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttttataatt
tRNA gene sequence 
GGAAGCGTAAGGGGGCTGGTGTCCCTCCCGGGCTTCAAACCCGGTGCACCCCAAAATAAA
AGGGGTGGGTGGGTTCAATTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
aaaaataaaa
Secondary structure (Cloverleaf model)
>C11122642	SeC	TCA
                   t      GCCA aaaaataaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    A     C A C C C     A
      T C G        A      | | | | |     A
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G T          C     TGCACCCCAAAATAAAAGGGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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