The detailed information of tRNA gene sequence


Sequence ID>C11122760
Genome IDCP002683
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesThermodesulfatator indicus DSM 15286 [CP002683]
Start position on genome 1988684
End posion on genome 1988779
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggccgccagt
tRNA gene sequence 
GGAAGCGCCAGGGGCCTGGTGGCCCCCCCGGGCTTCAAACCCGGTGCACCGTCGGAGACG
GCGGTGGGTGGGTTCGATTCCCATGCGCTTCCGCCA
Downstream region at tRNA end position 
tttctggttg
Secondary structure (Cloverleaf model)
>C11122760	SeC	TCA
                   t      GCCA tttctggttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    C     T A C C C     A
      T C C        A      + | | | |     G
    G       G G G G       G T G G G     C
    G       | | | |                 T T
    T       C C C C
      G G          C     TGCACCGTCGGAGACGGCGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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