The detailed information of tRNA gene sequence


Sequence ID>WENV11101037
Genome IDAFSR01001600
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 3589
End posion on genome 3681
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagggtgcgc
tRNA gene sequence 
GGAGAGGTAGCATAGCCCGGTCTAATGCGCGCGCCTGGAGAGCGCGTGGGCCTGAACAAG
GCCTCGCAGGTTCAAATCCTGTCCTCTCCGCCT
Downstream region at tRNA end position 
tctttattcc
Secondary structure (Cloverleaf model)
>WENV11101037	Ser	GGA
                   c      GCCT tctttattcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C C G A        A      + | | | |     A
  C         T A C G       G C A G G     C
  G         | | | |                 T T
  G         A T G C
    T C T A        G     TGGGCCTGAACAAGGCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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