The detailed information of tRNA gene sequence


Sequence ID>WENV11101087
Genome IDAFSR01003056
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1325
End posion on genome 1251
Amino Acid Pro
Anticodon AGG
Upstream region at tRNA start position 
ggggccgttt
tRNA gene sequence 
CGGGGAGTAGCTCAGCCCGGTAGAGCACCAGTTTAGGGGACTGGGGGTCGTGGGTTCAAA
TCCCGCCTCCCCGACtt
Downstream region at tRNA end position 
taaggcagcc
Secondary structure (Cloverleaf model)
>WENV11101087	Pro	AGG
                   t      ACtt taaggcagcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     A
    C       C T C G       G T G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  T       G
                  T       G
                    A G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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