The detailed information of tRNA gene sequence


Sequence ID>WENV11101101
Genome IDAFSR01003526
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 4464
End posion on genome 4370
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aatctcgatt
tRNA gene sequence 
GAGAGCGCACATGGCCCGGTGGCTGTCGCGGTCTTCAAAACCGTTGGGCGGAGTGACGAA
CTGCGCCGGTGGGTTCGACTCCCACGCGCTCTCGCga
Downstream region at tRNA end position 
acgtgagaga
Secondary structure (Cloverleaf model)
>WENV11101101	SeC(p)	TCA
                   t      GCga acgtgagaga
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T C
                    A     C A C C C     A
      C C C        C      | | | | |     G
    G       G G T A       G T G G G     C
    G       | + + |                 T T
    T       C T G T
      G G          C     TGGGCGGAGTGACGAACTGCGCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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