The detailed information of tRNA gene sequence


Sequence ID>WENV11101132
Genome IDAFSR01004660
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 597
End posion on genome 508
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
tatagggtgt
tRNA gene sequence
GGAGAGATGCCGGAGTGGTTGAACGGGGCGGTCTCGAAAACCGTTGTGGCCCGTATGGGT
CACCGTGAGTTCGAATCTCACTCTCTCCGCtc
Downstream region at tRNA end position
atgcgacgcc
Secondary structure (Cloverleaf model)
>WENV11101132	Ser	CGA
                   t      GCtc atgcgacgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G A G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGGCCCGTATGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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