The detailed information of tRNA gene sequence


Sequence ID>WENV11101174
Genome IDAFSR01005898
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1300
End posion on genome 1225
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccgatgat
tRNA gene sequence 
CGCGGGGTGGAGCAATGGGTAGCTCGCCAGGCTCATAACCTGGAGGTTGCAGGTTCAAGT
CCTGCCCCCGCTACAA
Downstream region at tRNA end position 
tcgagaggtc
Secondary structure (Cloverleaf model)
>WENV11101174	Met	CAT
                   t      ACAA tcgagaggtc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T A A        G      | | | | |     A
    G       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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