The detailed information of tRNA gene sequence


Sequence ID>WENV11101183
Genome IDAFSR01006251
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1537
End posion on genome 1629
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagaagatT
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCTTAAGGCAGCGGTTTGCTAAACCGCCGTAGTACTGAAAGGT
GCTACCGAGGGTTCGAATCCCTCCCTCTCCGTaa
Downstream region at tRNA end position 
taatagatag
Secondary structure (Cloverleaf model)
>WENV11101183	Ser	GCT
                   T      GTaa taatagatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        A     CGTAGTACTGAAAGGTGCTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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