The detailed information of tRNA gene sequence


Sequence ID>WENV11101184
Genome IDAFSR01006293
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 10597
End posion on genome 10692
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcctggcccT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCTTCCTGCTAAGAAGTTACGGGGCCCAAAAGC
TCCGTCGAGGGTTCGAATCCCTCCCTCTCCGTCC
Downstream region at tRNA end position 
Atatttgctg
Secondary structure (Cloverleaf model)
>WENV11101184	Ser	GCT
                   T      GTCC Atatttgctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TACGGGGCCCAAAAGCTCCGTC
                    G + T
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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