The detailed information of tRNA gene sequence


Sequence ID>WENV11101205
Genome IDAFSR01006533
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1247
End posion on genome 1161
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
catcgcatta
tRNA gene sequence 
CCGGAGTTGGCCGAGTGGTCAATGGCAGCAGACTGTAAATCTGCCGGGTTTGTCCCTACC
GAGGTTCGAATCCTCGACTCCGGACCA
Downstream region at tRNA end position 
ttgtgttaag
Secondary structure (Cloverleaf model)
>WENV11101205	Tyr	GTA
                   a      ACCA ttgtgttaag
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G C T C C     A
      T G A        G      | | | | |     G
    G       G C C G       C G A G G     C
    G       + | | |                 T T
    T       T G G C
      C A A        A     CGGGTTTGTCCCTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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