The detailed information of tRNA gene sequence


Sequence ID>WENV11101233
Genome IDAFSR01006963
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 32372
End posion on genome 32297
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acagctttgc
tRNA gene sequence 
AGGGGTATGGTGTCAATGGTCAGCACGTCGGTCTCCAAAACCGAAAGTACGGGTTCGACT
CCTGTTACCCCTGCCA
Downstream region at tRNA end position 
attcactcct
Secondary structure (Cloverleaf model)
>WENV11101233	Trp	CCA
                   c      GCCA attcactcct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T C
                    T     T G T C C     A
      A A C        G      | | + | |     G
    T       T G T G       A C G G G     C
    G       + | | |                 T T
    G       G C A C
      T C A        G     AAGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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