The detailed information of tRNA gene sequence


Sequence ID>WENV11101250
Genome IDAFSR01007514
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1203
End posion on genome 1111
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
ggctcgcacc
tRNA gene sequence
GGAGAGGTGGCCGAGTGGCTGAAGGCAACGCTTTGCTAAAGCGTCATACGGTCTCAAGCT
GTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position
cccagcagca
Secondary structure (Cloverleaf model)
>WENV11101250	Ser	GCT
                   c      GCCA cccagcagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACGGTCTCAAGCTGTATC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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