The detailed information of tRNA gene sequence


Sequence ID>WENV11101267
Genome IDAFSR01008063
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 115
End posion on genome 190
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acttacaaat
tRNA gene sequence 
ACGGGCGTAGCTCAATCGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGTGGGTTCGAGT
CCTACCGCCCGTGCAA
Downstream region at tRNA end position 
agtcgcaact
Secondary structure (Cloverleaf model)
>WENV11101267	Trp	CCA
                   t      GCAA agtcgcaact
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | + | |     G
    C       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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