The detailed information of tRNA gene sequence


Sequence ID>WENV11101285
Genome IDAFSR01008703
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 311
End posion on genome 387
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ccttgtgcgg
tRNA gene sequence 
GGGCCGTTAGCTCAGCTGGTGAGAGCGCCGGCCTTATAAGCCGGTGGTCGCGGGTTCAAG
TCCCGCACGGCCTACCA
Downstream region at tRNA end position 
ggcttgagtc
Secondary structure (Cloverleaf model)
>WENV11101285	Ile	TAT
                   g      ACCA ggcttgagtc
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T G A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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