The detailed information of tRNA gene sequence


Sequence ID>WENV11101287
Genome IDAFSR01008783
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 811
End posion on genome 735
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaatgcagT
tRNA gene sequence 
GCGTCCTTAGTTCAGTTGGTAGAACGTCGGTCTCCAAAACCGGATGTCGGGGGTTCGAGT
CCTCCAGGGCGCGTCA
Downstream region at tRNA end position 
aagacttaag
Secondary structure (Cloverleaf model)
>WENV11101287	Trp	CCA
                   T      GTCA aagacttaag
                     G - C
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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